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Gene: Trim52 (tripartite motif-containing 52) Rattus norvegicus
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Symbol: Trim52
Name: tripartite motif-containing 52
Description: Predicted to be involved in positive regulation of NF-kappaB transcription factor activity. Orthologous to human TRIM52 (tripartite motif containing 52); INTERACTS WITH bisphenol A; furan; vinclozolin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC290458; RGD1565615; similar to tripartite motif-containing 52
Orthologs:
Homo sapiens (human) : TRIM52 (tripartite motif containing 52)  HGNC  Alliance
Mus musculus (house mouse) : Trim52 (tripartite motif-containing 52)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM52 (tripartite motif containing 52)
Canis lupus familiaris (dog) : TRIM52 (tripartite motif containing 52)
Sus scrofa (pig) : TRIM52 (tripartite motif containing 52)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01590,364,517 - 90,388,295 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01593,853,538 - 93,893,023 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41590,214,463 - 90,216,142 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1581,984,878 - 81,986,557 (+)NCBICelera
Cytogenetic Map15q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trim52
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565615
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.