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Gene: Suv39h1 (suppressor of variegation 3-9 homolog 1) Rattus norvegicus
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Symbol: Suv39h1
Name: suppressor of variegation 3-9 homolog 1
Description: Predicted to have RNA polymerase II regulatory region sequence-specific DNA binding activity; histone methyltransferase activity (H3-K9 specific); and protein N-terminus binding activity. Involved in response to amphetamine and response to nutrient levels. Predicted to localize to the chromatin silencing complex and rDNA heterochromatin. Biomarker of pre-malignant neoplasm. Orthologous to human SUV39H1 (suppressor of variegation 3-9 homolog 1); PARTICIPATES IN histone modification pathway; INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC501653; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SUV39H1-like; RGD1565692; similar to Su(var)3-9 homolog; suppressor of variegation 3-9 homolog 1 (Drosophila)
Orthologs:
Homo sapiens (human) : SUV39H1 (suppressor of variegation 3-9 homolog 1)  HGNC  Alliance
Mus musculus (house mouse) : Suv39h1 (suppressor of variegation 3-9 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Suv39h1 (suppressor of variegation 3-9 homolog 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SUV39H1 (suppressor of variegation 3-9 homolog 1)
Canis lupus familiaris (dog) : SUV39H1 (suppressor of variegation 3-9 homolog 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Suv39h1 (suppressor of variegation 3-9 homolog 1)
Sus scrofa (pig) : SUV39H1 (suppressor of variegation 3-9 homolog 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X146,532,002 - 146,533,538 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X146,551,234 - 146,555,970 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X149,153,769 - 149,155,266 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX137,768,982 - 137,770,518 (-)NCBICelera
Cytogenetic MapXq36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Suv39h1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565692
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.