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Gene: Ccdc42 (coiled-coil domain containing 42) Rattus norvegicus
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Symbol: Ccdc42
Name: coiled-coil domain containing 42
Description: Predicted to be involved in spermatid development. Orthologous to human CCDC42 (coiled-coil domain containing 42); INTERACTS WITH 6-propyl-2-thiouracil; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: coiled-coil domain-containing protein 42A; LOC303234; RGD1565925
Orthologs:
Homo sapiens (human) : CCDC42 (coiled-coil domain containing 42)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc42 (coiled-coil domain containing 42)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc42 (coiled-coil domain containing 42)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC42 (coiled-coil domain containing 42)
Canis lupus familiaris (dog) : CCDC42 (coiled-coil domain containing 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc42 (coiled-coil domain containing 42)
Sus scrofa (pig) : CCDC42 (coiled-coil domain containing 42)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01055,169,312 - 55,179,489 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01054,913,271 - 54,923,448 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41055,339,083 - 55,349,260 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1052,458,268 - 52,468,446 (+)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc42
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565925
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.