Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Nkap (NFKB activating protein) Rattus norvegicus
Analyze
Symbol: Nkap
Name: NFKB activating protein
Description: Predicted to have chromatin DNA binding activity. Predicted to be involved in several processes, including hemopoiesis; negative regulation of transcription by RNA polymerase II; and positive regulation of alpha-beta T cell differentiation. Predicted to localize to cytosol and nucleoplasm. Orthologous to human NKAP (NFKB activating protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 2610020o08rik; NF-kappa-B-activating protein; nuclear NF-kappaB activating protein
Orthologs:
Homo sapiens (human) : NKAP (NFKB activating protein)  HGNC  Alliance
Mus musculus (house mouse) : Nkap (NFKB activating protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nkap (NFKB activating protein)
Pan paniscus (bonobo/pygmy chimpanzee) : NKAP (NFKB activating protein)
Canis lupus familiaris (dog) : NKAP (NFKB activating protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nkap (NFKB activating protein)
Sus scrofa (pig) : NKAP (NFKB activating protein)
Chlorocebus sabaeus (African green monkey) : NKAP (NFKB activating protein)
Heterocephalus glaber (naked mole-rat) : Nkap (NFKB activating protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X123,751,196 - 123,770,595 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX123,751,089 - 123,770,595 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X123,887,476 - 123,907,122 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X7,762,215 - 7,781,862 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX115,600,861 - 115,620,299 (+)NCBICelera
Cytogenetic MapXq35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nkap
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565955
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.