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Gene: Shfl (shiftless antiviral inhibitor of ribosomal frameshifting) Rattus norvegicus
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Symbol: Shfl
Name: shiftless antiviral inhibitor of ribosomal frameshifting
Description: Predicted to have ribosome binding activity and sequence-specific mRNA binding activity. Predicted to be involved in several processes, including defense response to other organism; regulation of translation; and viral translational frameshifting. Predicted to localize to several cellular components, including P-body; nucleoplasm; and viral replication complex. Orthologous to human SHFL (shiftless antiviral inhibitor of ribosomal frameshifting); INTERACTS WITH bisphenol A; 5-aza-2'-deoxycytidine (ortholog); aldehydo-D-glucose (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC500956; LOC500956; repressor of yield of DENV protein homolog; RyDEN; shiftless antiviral inhibitor of ribosomal frameshifting protein homolog; UPF0515 protein C19orf66 homolog
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0821,890,214 - 21,896,045 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl821,890,319 - 21,896,031 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0821,946,550 - 21,952,295 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4819,893,861 - 19,899,475 (+)NCBIRGSC3.4rn4RGSC3.4
Celera820,803,335 - 20,808,975 (+)NCBICelera
Cytogenetic Map8q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Shfl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1565995
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.