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Gene: Trappc12 (trafficking protein particle complex 12) Rattus norvegicus
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Symbol: Trappc12
Name: trafficking protein particle complex 12
Description: Predicted to have endopeptidase activity. Predicted to be involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; positive regulation of protein localization to kinetochore; and regulation of kinetochore assembly. Predicted to colocalize with endoplasmic reticulum-Golgi intermediate compartment and perinuclear region of cytoplasm. Orthologous to human TRAPPC12 (trafficking protein particle complex 12); INTERACTS WITH bisphenol A; glafenine; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC314013; RGD1566054; similar to Ttc15 protein; tetratricopeptide repeat domain 15; trafficking protein particle complex subunit 12; Ttc15
Orthologs:
Homo sapiens (human) : TRAPPC12 (trafficking protein particle complex 12)  HGNC  Alliance
Mus musculus (house mouse) : Trappc12 (trafficking protein particle complex 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trappc12 (trafficking protein particle complex 12)
Pan paniscus (bonobo/pygmy chimpanzee) : TRAPPC12 (trafficking protein particle complex 12)
Canis lupus familiaris (dog) : TRAPPC12 (trafficking protein particle complex 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trappc12 (trafficking protein particle complex 12)
Sus scrofa (pig) : TRAPPC12 (trafficking protein particle complex 12)
Chlorocebus sabaeus (African green monkey) : TRAPPC12 (trafficking protein particle complex 12)
Heterocephalus glaber (naked mole-rat) : Trappc12 (trafficking protein particle complex 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0647,954,822 - 48,020,280 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl647,955,310 - 48,020,271 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0656,656,858 - 56,722,308 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4646,567,200 - 46,632,324 (-)NCBIRGSC3.4rn4RGSC3.4
Celera644,544,476 - 44,609,939 (-)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trappc12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1566054
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.