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Gene: Trim58 (tripartite motif-containing 58) Rattus norvegicus
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Symbol: Trim58
Name: tripartite motif-containing 58
Description: Predicted to have several functions, including dynein heavy chain binding activity; dynein intermediate chain binding activity; and protein homodimerization activity. Predicted to be involved in several processes, including positive regulation of NF-kappaB transcription factor activity; positive regulation of erythrocyte enucleation; and protein ubiquitination. Predicted to localize to cytoplasm. Orthologous to human TRIM58 (tripartite motif containing 58); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: E3 ubiquitin-protein ligase TRIM58; LOC303167; RGD1566174; tripartite motif-containing protein 58
Orthologs:
Homo sapiens (human) : TRIM58 (tripartite motif containing 58)  HGNC  Alliance
Mus musculus (house mouse) : Trim58 (tripartite motif-containing 58)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim58 (tripartite motif containing 58)
Canis lupus familiaris (dog) : TRIM58 (tripartite motif containing 58)
Sus scrofa (pig) : TRIM58 (tripartite motif containing 58)
Chlorocebus sabaeus (African green monkey) : TRIM58 (tripartite motif containing 58)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01044,271,587 - 44,282,726 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1044,271,587 - 44,282,726 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01044,076,388 - 44,087,527 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41044,504,886 - 44,515,900 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1042,308,739 - 42,319,736 (+)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trim58
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1566174
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.