Gene: Trim71 (tripartite motif containing 71) Rattus norvegicus
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Symbol: Trim71
Name: tripartite motif containing 71
Description: Predicted to have miRNA binding activity, translation repressor activity, and ubiquitin protein ligase activity; predicted to be involved in several processes, including G1/S transition of mitotic cell cycle, cellular protein metabolic process, and regulation of gene expression; predicted to localize to the P-body; orthologous to human TRIM71 (tripartite motif containing 71); INTERACTS WITH benzo[a]pyrene (ortholog); benzo[e]pyrene (ortholog); bisphenol A (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: B-box zinc finger, Filamin and NHL repeat containing protein (123.8 kD) (lin-41); Drosophila dappled/ vertebrate TRipartite Motif protein related; E3 ubiquitin-protein ligase TRIM71; LOC301042; protein lin-41 homolog; RGD1566388; RING-type E3 ubiquitin transferase TRIM71; similar to abnormal cell LINeage LIN-41, heterochronic gene; similar to abnormal cell LINeage LIN-41, heterochronic gene (Lin41); tripartite motif containing 71, E3 ubiquitin protein ligase; tripartite motif-containing 71; tripartite motif-containing protein 71
Orthologs:
Homo sapiens (human) : TRIM71 (tripartite motif containing 71)  HGNC  Alliance
Mus musculus (house mouse) : Trim71 (tripartite motif-containing 71)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim71 (tripartite motif containing 71)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM71 (tripartite motif containing 71)
Canis lupus familiaris (dog) : TRIM71 (tripartite motif containing 71)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim71 (tripartite motif containing 71)
Sus scrofa (pig) : TRIM71 (tripartite motif containing 71)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08122,553,015 - 122,604,787 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08121,865,609 - 121,917,140 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48118,905,817 - 118,972,365 (-)NCBIRGSC3.4rn4RGSC3.4
Celera8113,446,095 - 113,498,183 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim71
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1566388
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.