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Gene: Zbtb42 (zinc finger and BTB domain containing 42) Rattus norvegicus
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Symbol: Zbtb42
Name: zinc finger and BTB domain containing 42
Description: Predicted to have DNA binding activity and metal ion binding activity. Predicted to be involved in cellular response to DNA damage stimulus; muscle organ development; and negative regulation of transcription by RNA polymerase II. Predicted to localize to the cytoplasm; nucleoplasm; and plasma membrane. Human ortholog(s) of this gene implicated in lethal congenital contracture syndrome. Orthologous to human ZBTB42 (zinc finger and BTB domain containing 42); INTERACTS WITH bisphenol A; orphenadrine; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC691556; similar to zinc finger protein 238; zinc finger and BTB domain-containing protein 42
Orthologs:
Homo sapiens (human) : ZBTB42 (zinc finger and BTB domain containing 42)  HGNC  Alliance
Mus musculus (house mouse) : Zbtb42 (zinc finger and BTB domain containing 42)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zbtb42 (zinc finger and BTB domain containing 42)
Pan paniscus (bonobo/pygmy chimpanzee) : ZBTB42 (zinc finger and BTB domain containing 42)
Canis lupus familiaris (dog) : ZBTB42 (zinc finger and BTB domain containing 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zbtb42 (zinc finger and BTB domain containing 42)
Sus scrofa (pig) : ZBTB42 (zinc finger and BTB domain containing 42)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06137,238,899 - 137,247,115 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06146,247,092 - 146,254,155 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46137,664,393 - 137,666,521 (+)NCBIRGSC3.4rn4RGSC3.4
Celera6129,286,056 - 129,288,123 (+)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Zbtb42
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1582758
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.