Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Sys1 (Sys1 golgi trafficking protein) Rattus norvegicus
Analyze
Symbol: Sys1
Name: Sys1 golgi trafficking protein
Description: Predicted to be involved in Golgi to endosome transport; Golgi to plasma membrane protein transport; and protein localization to Golgi apparatus. Predicted to localize to the integral component of Golgi membrane and trans-Golgi network. Orthologous to human SYS1 (SYS1 golgi trafficking protein); INTERACTS WITH bisphenol A; diuron; endosulfan.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC685079; protein SYS1 homolog; similar to Protein SYS1 homolog; SYS1 Golgi-localized integral membrane protein homolog; SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
Orthologs:
Homo sapiens (human) : SYS1 (SYS1 golgi trafficking protein)  HGNC  Alliance
Mus musculus (house mouse) : Sys1 (SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sys1 (SYS1 golgi trafficking protein)
Pan paniscus (bonobo/pygmy chimpanzee) : SYS1 (SYS1 golgi trafficking protein)
Canis lupus familiaris (dog) : SYS1 (SYS1 golgi trafficking protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sys1 (SYS1 golgi trafficking protein)
Sus scrofa (pig) : SYS1 (SYS1 golgi trafficking protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03160,908,779 - 160,913,281 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03167,089,065 - 167,093,568 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43155,482,347 - 155,486,078 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3151,802,279 - 151,806,781 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sys1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1583224
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.