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Gene: Rnf169 (ring finger protein 169) Rattus norvegicus
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Symbol: Rnf169
Name: ring finger protein 169
CRRD ID: 1583288
Description: Predicted to have K63-linked polyubiquitin modification-dependent protein binding activity and nucleosome binding activity. Predicted to be involved in cellular response to DNA damage stimulus and negative regulation of double-strand break repair. Predicted to localize to cytosol; nuclear lumen; and site of double-strand break. Orthologous to human RNF169 (ring finger protein 169); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: E3 ubiquitin-protein ligase RNF169; hypothetical protein LOC685009; LOC685009
Orthologs:
Homo sapiens (human) : RNF169 (ring finger protein 169)  HGNC  Alliance
Mus musculus (house mouse) : Rnf169 (ring finger protein 169)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnf169 (ring finger protein 169)
Pan paniscus (bonobo/pygmy chimpanzee) : RNF169 (ring finger protein 169)
Canis lupus familiaris (dog) : RNF169 (ring finger protein 169)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnf169 (ring finger protein 169)
Sus scrofa (pig) : RNF169 (ring finger protein 169)
Chlorocebus sabaeus (African green monkey) : RNF169 (ring finger protein 169)
Heterocephalus glaber (naked mole-rat) : Rnf169 (ring finger protein 169)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01164,917,069 - 164,978,061 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1164,922,080 - 164,977,633 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01171,119,356 - 171,180,334 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41157,289,186 - 157,313,978 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1152,335,857 - 152,397,398 (-)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rnf169
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1583288
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.