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Gene: Pcgf5 (polycomb group ring finger 5) Rattus norvegicus
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Symbol: Pcgf5
Name: polycomb group ring finger 5
Description: Predicted to have DNA-binding transcription factor activity and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in histone H2A-K119 monoubiquitination; inactivation of X chromosome by genetic imprinting; and positive regulation of transcription by RNA polymerase II. Predicted to colocalize with the X chromosome. Orthologous to human PCGF5 (polycomb group ring finger 5); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC681178; MGC189388; polycomb group RING finger protein 5; similar to polycomb group ring finger 5
Orthologs:
Homo sapiens (human) : PCGF5 (polycomb group ring finger 5)  HGNC  Alliance
Mus musculus (house mouse) : Pcgf5 (polycomb group ring finger 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pcgf5 (polycomb group ring finger 5)
Pan paniscus (bonobo/pygmy chimpanzee) : PCGF5 (polycomb group ring finger 5)
Canis lupus familiaris (dog) : PCGF5 (polycomb group ring finger 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pcgf5 (polycomb group ring finger 5)
Sus scrofa (pig) : PCGF5 (polycomb group ring finger 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01254,974,688 - 255,090,925 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01262,240,378 - 262,351,837 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41240,564,487 - 240,689,320 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1231,160,446 - 231,270,886 (+)NCBICelera
Cytogenetic Map1q53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pcgf5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1583513
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.