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Gene: Alkal1 (ALK and LTK ligand 1) Rattus norvegicus
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Symbol: Alkal1
Name: ALK and LTK ligand 1
Description: Predicted to have receptor signaling protein tyrosine kinase activator activity and receptor tyrosine kinase binding activity. Predicted to be involved in positive regulation of ERK1 and ERK2 cascade; positive regulation of ERK5 cascade; and positive regulation of neuron projection development. Orthologous to human ALKAL1 (ALK and LTK ligand 1); INTERACTS WITH manganese(II) chloride; amiodarone (ortholog); carbon nanotube (ortholog).
Type: protein-coding
RefSeq Status: INFERRED
Also known as: Fam150a; family with sequence similarity 150, member A; hypothetical protein LOC681161; LOC100910984; LOC681161; protein FAM150A-like
Orthologs:
Homo sapiens (human) : ALKAL1 (ALK and LTK ligand 1)  HGNC  Alliance
Mus musculus (house mouse) : Alkal1 (ALK and LTK ligand 1)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : ALKAL1 (ALK and LTK ligand 1)
Canis lupus familiaris (dog) : ALKAL1 (ALK and LTK ligand 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Alkal1 (ALK and LTK ligand 1)
Sus scrofa (pig) : ALKAL1 (ALK and LTK ligand 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0512,896,136 - 12,925,571 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl512,896,558 - 12,925,571 (-)Ensembl
Rnor_5.0517,668,931 - 17,697,947 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4513,167,027 - 13,196,791 (-)NCBIRGSC3.4rn4RGSC3.4
Celera512,433,940 - 12,464,105 (-)NCBICelera
Cytogenetic Map5q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Alkal1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1583530
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.