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Gene: Pgd (phosphogluconate dehydrogenase) Rattus norvegicus
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Symbol: Pgd
Name: phosphogluconate dehydrogenase
Description: Exhibits several functions, including NADP binding activity; carboxylic acid binding activity; and phosphogluconate dehydrogenase (decarboxylating) activity. Involved in D-gluconate metabolic process and pentose-phosphate shunt, oxidative branch. Localizes to the intracellular membrane-bounded organelle. Orthologous to human PGD (phosphogluconate dehydrogenase); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomerase deficiency pathway; INTERACTS WITH (R)-noradrenaline; 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphogluconate dehydrogenase, decarboxylating-like; Cc2-27; LOC100360180; Pgd_mapped; phosphogluconate dehydrogenase (mapped)
Orthologs:
Homo sapiens (human) : PGD (phosphogluconate dehydrogenase)  HGNC  Alliance
Mus musculus (house mouse) : Pgd (phosphogluconate dehydrogenase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pgd (phosphogluconate dehydrogenase)
Pan paniscus (bonobo/pygmy chimpanzee) : PGD (phosphogluconate dehydrogenase)
Canis lupus familiaris (dog) : PGD (phosphogluconate dehydrogenase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pgd (phosphogluconate dehydrogenase)
Sus scrofa (pig) : PGD (phosphogluconate dehydrogenase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05165,966,128 - 165,982,327 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05169,614,705 - 169,630,921 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45166,221,292 - 166,237,485 (-)NCBIRGSC3.4rn4RGSC3.4
Celera5157,853,711 - 157,869,910 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pgd
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1583832
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.