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Gene: Foxl1 (forkhead box L1) Rattus norvegicus
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Symbol: Foxl1
Name: forkhead box L1
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in several processes, including Peyer's patch morphogenesis; proteoglycan biosynthetic process; and visceral mesoderm-endoderm interaction involved in midgut development. Predicted to localize to nucleus. Orthologous to human FOXL1 (forkhead box L1); INTERACTS WITH 17beta-estradiol (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); all-trans-retinoic acid (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: forkhead box protein L1; LOC687553; similar to Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6)
Orthologs:
Homo sapiens (human) : FOXL1 (forkhead box L1)  HGNC  Alliance
Mus musculus (house mouse) : Foxl1 (forkhead box L1)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : FOXL1 (forkhead box L1)
Canis lupus familiaris (dog) : FOXL1 (forkhead box L1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Foxl1 (forkhead box L1)
Sus scrofa (pig) : FOXL1 (forkhead box L1)
Chlorocebus sabaeus (African green monkey) : FOXL1 (forkhead box L1)
Heterocephalus glaber (naked mole-rat) : Foxl1 (forkhead box L1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01953,054,887 - 53,058,624 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1953,055,745 - 53,056,770 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01963,799,271 - 63,802,117 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1948,442,841 - 48,446,578 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Foxl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584212
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.