Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Foxl1 (forkhead box L1) Rattus norvegicus
Symbol: Foxl1
Name: forkhead box L1
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in several processes, including Peyer's patch morphogenesis; proteoglycan biosynthetic process; and visceral mesoderm-endoderm interaction involved in midgut development. Predicted to localize to nucleus. Orthologous to human FOXL1 (forkhead box L1); INTERACTS WITH 17beta-estradiol (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); all-trans-retinoic acid (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: forkhead box protein L1; LOC687553; similar to Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6)
Homo sapiens (human) : FOXL1 (forkhead box L1)  HGNC  Alliance
Mus musculus (house mouse) : Foxl1 (forkhead box L1)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : FOXL1 (forkhead box L1)
Canis lupus familiaris (dog) : FOXL1 (forkhead box L1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Foxl1 (forkhead box L1)
Sus scrofa (pig) : FOXL1 (forkhead box L1)
Chlorocebus sabaeus (African green monkey) : FOXL1 (forkhead box L1)
Heterocephalus glaber (naked mole-rat) : Foxl1 (forkhead box L1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01953,054,887 - 53,058,624 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1953,055,745 - 53,056,770 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01963,799,271 - 63,802,117 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1948,442,841 - 48,446,578 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Foxl1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584212
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.