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Gene: Foxf1 (forkhead box F1) Rattus norvegicus
Symbol: Foxf1
Name: forkhead box F1
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including animal organ development; blood vessel development; and digestive tract development. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in persistent fetal circulation syndrome. Orthologous to human FOXF1 (forkhead box F1); INTERACTS WITH bisphenol A; nitrofen; tetrachloromethane.
Type: protein-coding
RefSeq Status: MODEL
Also known as: forkhead box protein F1; LOC687536; similar to Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead-related transcription factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog 8) (HFH-8)
Homo sapiens (human) : FOXF1 (forkhead box F1)  HGNC  Alliance
Mus musculus (house mouse) : Foxf1 (forkhead box F1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Foxf1 (forkhead box F1)
Pan paniscus (bonobo/pygmy chimpanzee) : FOXF1 (forkhead box F1)
Canis lupus familiaris (dog) : FOXF1 (forkhead box F1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Foxf1 (forkhead box F1)
Sus scrofa (pig) : FOXF1 (forkhead box F1)
Chlorocebus sabaeus (African green monkey) : FOXF1 (forkhead box F1)
Heterocephalus glaber (naked mole-rat) : Foxf1 (forkhead box F1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01953,012,306 - 53,016,100 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1953,012,332 - 53,016,086 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01963,756,636 - 63,760,430 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1948,400,056 - 48,404,066 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Foxf1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584229
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-05-05
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.