Gene: Snx9 (sorting nexin 9) Rattus norvegicus
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Symbol: Snx9
Name: sorting nexin 9
Description: Predicted to have several functions, including 1-phosphatidylinositol binding activity, Arp2/3 complex binding activity, and protein homodimerization activity; predicted to be involved in several processes, including cytoskeleton-dependent cytokinesis, endosomal transport, and positive regulation of cellular metabolic process; predicted to colocalize with the clathrin-coated vesicle; orthologous to human SNX9 (sorting nexin 9); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; ethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC683687; MGC188567; similar to Sorting nexin-9; sorting nexin-9
Orthologs:
Homo sapiens (human) : SNX9 (sorting nexin 9)  HGNC  Alliance
Mus musculus (house mouse) : Snx9 (sorting nexin 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snx9 (sorting nexin 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SNX9 (sorting nexin 9)
Canis lupus familiaris (dog) : SNX9 (sorting nexin 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snx9 (sorting nexin 9)
Sus scrofa (pig) : SNX9 (sorting nexin 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0146,780,142 - 46,826,250 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0148,084,891 - 48,130,894 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera142,155,821 - 42,201,820 (+)NCBICelera
Cytogenetic Map1q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snx9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584466
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.