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Gene: Slbp (stem-loop binding protein) Rattus norvegicus
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Symbol: Slbp
Name: stem-loop binding protein
Description: Predicted to have histone pre-mRNA stem-loop binding activity; identical protein binding activity; and mRNA binding activity. Predicted to be involved in mRNA 3'-end processing by stem-loop binding activity and cleavage and mRNA transport. Predicted to localize to the cytosol and nucleus. Orthologous to human SLBP (stem-loop binding protein); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 3H-1,2-dithiole-3-thione; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: histone RNA hairpin-binding protein; LOC681062; MGC187387; similar to stem-loop binding protein
Orthologs:
Homo sapiens (human) : SLBP (stem-loop binding protein)  HGNC  Alliance
Mus musculus (house mouse) : Slbp (stem-loop binding protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slbp (stem-loop binding protein)
Pan paniscus (bonobo/pygmy chimpanzee) : SLBP (stem-loop binding protein)
Canis lupus familiaris (dog) : SLBP (stem-loop binding protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slbp (stem-loop binding protein)
Sus scrofa (pig) : SLBP (stem-loop binding protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01482,356,916 - 82,366,368 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1482,356,916 - 82,366,368 (+)Ensembl
Rnor_5.01483,046,030 - 83,056,021 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41482,767,415 - 82,778,030 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1475,995,251 - 76,005,216 (+)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slbp
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584682
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.