Gene: Vps25 (vacuolar protein sorting 25 homolog) Rattus norvegicus
Analyze
Symbol: Vps25
Name: vacuolar protein sorting 25 homolog
Description: Predicted to have protein N-terminus binding activity, protein homodimerization activity, and structural molecule activity; predicted to be involved in negative regulation of epidermal growth factor-activated receptor activity and protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; predicted to localize to the ESCRT II complex, cytosol, and nucleus; orthologous to human VPS25 (vacuolar protein sorting 25 homolog); PARTICIPATES IN endocytosis pathway; INTERACTS WITH acrylamide; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ELL-associated protein of 20 kDa; ESCRT-II complex subunit VPS25; LOC681059; similar to Vacuolar protein sorting protein 25 (ELL-associated protein of 20 kDa); vacuolar protein sorting 25; vacuolar protein sorting 25 (S. cerevisiae); vacuolar protein sorting 25 homolog (S. cerevisiae); vacuolar protein-sorting-associated protein 25
Orthologs:
Homo sapiens (human) : VPS25 (vacuolar protein sorting 25 homolog)  HGNC  Alliance
Mus musculus (house mouse) : Vps25 (vacuolar protein sorting 25)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps25 (vacuolar protein sorting 25 homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS25 (vacuolar protein sorting 25 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps25 (vacuolar protein sorting 25 homolog)
Sus scrofa (pig) : VPS25 (vacuolar protein sorting 25 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01089,174,684 - 89,180,165 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01088,973,180 - 88,978,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41090,277,207 - 90,288,162 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1084,913,038 - 84,918,528 (+)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vps25
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584685
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.