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Gene: Paxbp1 (PAX3 and PAX7 binding protein 1) Rattus norvegicus
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Symbol: Paxbp1
Name: PAX3 and PAX7 binding protein 1
Description: Predicted to have RNA polymerase II proximal promoter sequence-specific DNA binding activity and transcription factor binding activity. Predicted to be involved in several processes, including positive regulation of histone methylation; positive regulation of myoblast proliferation; and regulation of transcription by RNA polymerase II. Predicted to localize to the nucleus. Orthologous to human PAXBP1 (PAX3 and PAX7 binding protein 1); INTERACTS WITH bisphenol A; cobalt dichloride; valproic acid.
Type: protein-coding
RefSeq Status: MODEL
Also known as: GC-rich sequence DNA-binding factor 1; Gcfc1; LOC681004; PAX3- and PAX7-binding protein 1; similar to GC-rich sequence DNA-binding factor homolog
Orthologs:
Homo sapiens (human) : PAXBP1 (PAX3 and PAX7 binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Paxbp1 (PAX3 and PAX7 binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Paxbp1 (PAX3 and PAX7 binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Canis lupus familiaris (dog) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Paxbp1 (PAX3 and PAX7 binding protein 1)
Sus scrofa (pig) : PAXBP1 (PAX3 and PAX7 binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01131,184,456 - 31,213,891 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01134,795,249 - 34,824,684 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,001,934 - 31,030,820 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1129,938,585 - 29,968,020 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Paxbp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584739
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.