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Gene: Paxbp1 (PAX3 and PAX7 binding protein 1) Rattus norvegicus
Symbol: Paxbp1
Name: PAX3 and PAX7 binding protein 1
Description: Predicted to have RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and transcription factor binding activity. Predicted to be involved in several processes, including positive regulation of histone methylation; positive regulation of myoblast proliferation; and regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human PAXBP1 (PAX3 and PAX7 binding protein 1); INTERACTS WITH bisphenol A; cobalt dichloride; tetrachloromethane.
Type: protein-coding
RefSeq Status: MODEL
Also known as: GC-rich sequence DNA-binding factor 1; Gcfc1; LOC681004; PAX3- and PAX7-binding protein 1; similar to GC-rich sequence DNA-binding factor homolog
Homo sapiens (human) : PAXBP1 (PAX3 and PAX7 binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Paxbp1 (PAX3 and PAX7 binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Paxbp1 (PAX3 and PAX7 binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Canis lupus familiaris (dog) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Paxbp1 (PAX3 and PAX7 binding protein 1)
Sus scrofa (pig) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Chlorocebus sabaeus (African green monkey) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Heterocephalus glaber (naked mole-rat) : Paxbp1 (PAX3 and PAX7 binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01131,184,456 - 31,213,891 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,185,473 - 31,213,787 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01134,795,249 - 34,824,684 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,001,934 - 31,030,820 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1129,938,585 - 29,968,020 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)

References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Paxbp1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584739
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.