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Gene: Barx2 (BARX homeobox 2) Rattus norvegicus
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Symbol: Barx2
Name: BARX homeobox 2
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in cartilage condensation; myotube differentiation; and regulation of transcription by RNA polymerase II. Predicted to localize to the cytosol; nucleoplasm; and transcription factor complex. Orthologous to human BARX2 (BARX homeobox 2); INTERACTS WITH indole-3-methanol; N-acetyl-L-cysteine; N-nitrosodiethylamine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: BarH-like homeobox 2; BARX homeobox 2, pseudogene 1; Barx2-ps1; homeobox protein BarH-like 2; LOC679701; similar to BarH-like homeobox 2
Orthologs:
Homo sapiens (human) : BARX2 (BARX homeobox 2)  HGNC  Alliance
Mus musculus (house mouse) : Barx2 (BarH-like homeobox 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Barx2 (BARX homeobox 2)
Pan paniscus (bonobo/pygmy chimpanzee) : BARX2 (BARX homeobox 2)
Canis lupus familiaris (dog) : BARX2 (BARX homeobox 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Barx2 (BARX homeobox 2)
Sus scrofa (pig) : BARX2 (BARX homeobox 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0832,950,878 - 33,018,245 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0832,973,711 - 33,040,595 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4831,572,341 - 31,659,306 (-)NCBIRGSC3.4rn4RGSC3.4
Celera831,710,513 - 31,778,220 (-)NCBICelera
Cytogenetic Map8q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Barx2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584840
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.