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Gene: Lsm10 (LSM10, U7 small nuclear RNA associated) Rattus norvegicus
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Symbol: Lsm10
Name: LSM10, U7 small nuclear RNA associated
Description: Predicted to have U7 snRNA binding activity and histone pre-mRNA DCP binding activity. Predicted to be involved in positive regulation of G1/S transition of mitotic cell cycle. Predicted to localize to Cajal body and U7 snRNP. Orthologous to human LSM10 (LSM10, U7 small nuclear RNA associated); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; cobalt dichloride; finasteride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC366468; similar to U7 snRNP-specific Sm-like protein LSM10; U7 snRNA-associated Sm-like protein LSm10; U7 snRNP-specific Sm-like protein LSM10
Orthologs:
Homo sapiens (human) : LSM10 (LSM10, U7 small nuclear RNA associated)  HGNC  Alliance
Mus musculus (house mouse) : Lsm10 (U7 snRNP-specific Sm-like protein LSM10)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lsm10 (LSM10, U7 small nuclear RNA associated)
Pan paniscus (bonobo/pygmy chimpanzee) : LSM10 (LSM10, U7 small nuclear RNA associated)
Canis lupus familiaris (dog) : LSM10 (LSM10, U7 small nuclear RNA associated)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lsm10 (LSM10, U7 small nuclear RNA associated)
Sus scrofa (pig) : LSM10 (LSM10, U7 small nuclear RNA associated)
Chlorocebus sabaeus (African green monkey) : LSM10 (LSM10, U7 small nuclear RNA associated)
Heterocephalus glaber (naked mole-rat) : Lsm10 (LSM10, U7 small nuclear RNA associated)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05144,106,339 - 144,108,703 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5144,106,802 - 144,108,708 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05147,876,104 - 147,878,239 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45145,450,575 - 145,452,403 (+)NCBIRGSC3.4rn4RGSC3.4
Celera5136,884,201 - 136,886,029 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lsm10
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1584914
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.