Gene: LRRTM1 (leucine rich repeat transmembrane neuronal 1) Rattus norvegicus
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Symbol: LRRTM1
Name: leucine rich repeat transmembrane neuronal 1
Description: Involved in regulation of postsynaptic density assembly, regulation of presynapse assembly, and synapse organization; localizes to the excitatory synapse, glutamatergic synapse, and integral component of postsynaptic membrane; orthologous to human LRRTM1 (leucine rich repeat transmembrane neuronal 1); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; 3,4-methylenedioxymethamphetamine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: leucine-rich repeat transmembrane neuronal protein 1; LOC679668; similar to leucine-rich repeat transmembrane neuronal 1
Orthologs:
Homo sapiens (human) : LRRTM1 (leucine rich repeat transmembrane neuronal 1)  HGNC  Alliance
Mus musculus (house mouse) : Lrrtm1 (leucine rich repeat transmembrane neuronal 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lrrtm1 (leucine rich repeat transmembrane neuronal 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LRRTM1 (leucine rich repeat transmembrane neuronal 1)
Canis lupus familiaris (dog) : LRRTM1 (leucine rich repeat transmembrane neuronal 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lrrtm1 (leucine rich repeat transmembrane neuronal 1)
Sus scrofa (pig) : LRRTM1 (leucine rich repeat transmembrane neuronal 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04108,300,927 - 108,316,373 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04173,006,611 - 173,022,018 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44111,166,760 - 111,182,344 (+)NCBIRGSC3.4rn4RGSC3.4
Celera498,746,001 - 98,761,096 (+)NCBICelera
Cytogenetic Map4q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on LRRTM1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1585921
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.