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Gene: Hoxc4 (homeo box C4) Rattus norvegicus
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Symbol: Hoxc4
Name: homeo box C4
Description: Predicted to have several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; HMG box domain binding activity; and RNA polymerase II distal enhancer sequence-specific DNA binding activity. Involved in cellular response to glial cell derived neurotrophic factor and positive regulation of male germ-line stem cell asymmetric division. Predicted to localize to the nucleus. Orthologous to human HOXC4 (homeobox C4); INTERACTS WITH (RS)-amphetamine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeo box C4 (mapped); Homeobox gene C4; homeobox protein Hox-C4; homeobox protein R3; Hox3r3; Hoxc4_mapped
Orthologs:
Homo sapiens (human) : HOXC4 (homeobox C4)  HGNC  Alliance
Mus musculus (house mouse) : Hoxc4 (homeobox C4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxc4 (homeobox C4)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXC4 (homeobox C4)
Canis lupus familiaris (dog) : HOXC4 (homeobox C4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxc4 (homeobox C4)
Sus scrofa (pig) : HOXC4 (homeobox C4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07144,646,605 - 144,652,589 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07142,378,916 - 142,441,486 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47141,796,934 - 141,799,476 (+)NCBIRGSC3.4rn4RGSC3.4
Celera7130,596,539 - 130,599,081 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Hoxc4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1586210
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.