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Gene: Sox30 (SRY-box transcription factor 30) Rattus norvegicus
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Symbol: Sox30
Name: SRY-box transcription factor 30
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II; response to corticosteroid; and spermatogenesis. Predicted to localize to the nucleus. Orthologous to human SOX30 (SRY-box 30); INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; cocaine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC689918; similar to SRY-box containing gene 30; SRY (sex determining region Y)-box 30; SRY box 30; transcription factor SOX-30
Orthologs:
Homo sapiens (human) : SOX30 (SRY-box transcription factor 30)  HGNC  Alliance
Mus musculus (house mouse) : Sox30 (SRY (sex determining region Y)-box 30)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sox30 (SRY-box transcription factor 30)
Pan paniscus (bonobo/pygmy chimpanzee) : SOX30 (SRY-box transcription factor 30)
Canis lupus familiaris (dog) : SOX30 (SRY-box transcription factor 30)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sox30 (SRY-box transcription factor 30)
Sus scrofa (pig) : SOX30 (SRY-box transcription factor 30)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01031,074,251 - 31,102,211 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01030,895,749 - 30,923,086 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41031,116,928 - 31,144,665 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1029,871,335 - 29,900,535 (+)NCBICelera
Cytogenetic Map10q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sox30
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1586382
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.