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Gene: Trabd2b (TraB domain containing 2B) Rattus norvegicus
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Symbol: Trabd2b
Name: TraB domain containing 2B
Description: Predicted to have Wnt-protein binding activity and metalloendopeptidase activity. Predicted to be involved in several processes, including negative regulation of Wnt signaling pathway; positive regulation of protein oxidation; and positive regulation of protein-containing complex assembly. Predicted to localize to integral component of organelle membrane and integral component of plasma membrane. Orthologous to human TRABD2B (TraB domain containing 2B); INTERACTS WITH endosulfan; 1,1-dichloroethene (ortholog); 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: hypothetical LOC298409; LOC298409; LOC689914; metalloprotease TIKI2; RGD1564942; similar to C05G5.5
Orthologs:
Homo sapiens (human) : TRABD2B (TraB domain containing 2B)  HGNC  Alliance
Mus musculus (house mouse) : Trabd2b (TraB domain containing 2B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trabd2b (TraB domain containing 2B)
Pan paniscus (bonobo/pygmy chimpanzee) : TRABD2B (TraB domain containing 2B)
Canis lupus familiaris (dog) : TRABD2B (TraB domain containing 2B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101956512 (metalloprotease TIKI2)
Sus scrofa (pig) : TRABD2B (TraB domain containing 2B)
Chlorocebus sabaeus (African green monkey) : TRABD2B (TraB domain containing 2B)
Heterocephalus glaber (naked mole-rat) : Trabd2b (TraB domain containing 2B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05133,220,986 - 133,437,151 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5133,221,139 - 133,420,644 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05137,016,915 - 137,231,017 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45134,778,167 - 134,978,965 (+)NCBIRGSC3.4rn4RGSC3.4
Celera5126,596,412 - 126,812,016 (+)NCBICelera
Cytogenetic Map5q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trabd2b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1586386
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.