Gene: Prdm12 (PR/SET domain 12) Rattus norvegicus
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Symbol: Prdm12
Name: PR/SET domain 12
Description: Predicted to have DNA-binding transcription factor activity, histone methyltransferase binding activity, and nucleic acid binding activity; predicted to be involved in detection of temperature stimulus involved in sensory perception of pain, neuron projection development, and positive regulation of histone H3-K9 dimethylation; predicted to localize to the nucleus; orthologous to human PRDM12 (PR/SET domain 12); INTERACTS WITH bisphenol A; copper atom; copper(0).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC688699; PR domain 12; PR domain containing 12; PR domain zinc finger protein 12; similar to PR domain containing 12
Orthologs:
Homo sapiens (human) : PRDM12 (PR/SET domain 12)  HGNC  Alliance
Mus musculus (house mouse) : Prdm12 (PR domain containing 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prdm12 (PR/SET domain 12)
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM12 (PR/SET domain 12)
Canis lupus familiaris (dog) : PRDM12 (PR/SET domain 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prdm12 (PR/SET domain 12)
Sus scrofa (pig) : PRDM12 (PR/SET domain 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0310,181,104 - 10,199,185 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0315,540,492 - 15,556,510 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4310,752,644 - 10,767,390 (+)NCBIRGSC3.4rn4RGSC3.4
Celera39,677,191 - 9,695,307 (+)NCBICelera
Cytogenetic Map3p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prdm12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1586401
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.