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Gene: Tcf23 (transcription factor 23) Rattus norvegicus
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Symbol: Tcf23
Name: transcription factor 23
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in decidualization; positive regulation of gene expression; and regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human TCF23 (transcription factor 23); INTERACTS WITH bis(2-ethylhexyl) phthalate; bisphenol A; Butylbenzyl phthalate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC688600; rCG61335-like; similar to transcription factor 23
Orthologs:
Homo sapiens (human) : TCF23 (transcription factor 23)  HGNC  Alliance
Mus musculus (house mouse) : Tcf23 (transcription factor 23)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcf23 (transcription factor 23)
Pan paniscus (bonobo/pygmy chimpanzee) : TCF23 (transcription factor 23)
Canis lupus familiaris (dog) : TCF23 (transcription factor 23)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcf23 (transcription factor 23)
Sus scrofa (pig) : TCF23 (transcription factor 23)
Chlorocebus sabaeus (African green monkey) : TCF23 (transcription factor 23)
Heterocephalus glaber (naked mole-rat) : Tcf23 (transcription factor 23)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0626,763,159 - 26,772,074 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,762,761 - 26,771,164 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,578,788 - 36,586,815 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,384,001 - 25,388,552 (-)NCBIRGSC3.4rn4RGSC3.4
Celera624,888,605 - 24,897,506 (-)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tcf23
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1586500
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.