Gene: Casq1 (calsequestrin 1) Rattus norvegicus
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Symbol: Casq1
Name: calsequestrin 1
Description: Exhibits calcium ion binding activity; involved in several processes, including regulation of sequestering of calcium ion, response to denervation involved in regulation of muscle adaptation, and response to organic substance; localizes to the I band, T-tubule, and terminal cisterna lumen; colocalizes with the Golgi apparatus; orthologous to human CASQ1 (calsequestrin 1); PARTICIPATES IN calcium/calcium-mediated signaling pathway; INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Aspartactin; calsequestrin 1 (fast-twitch, skeletal muscle); calsequestrin, skeletal muscle isoform; Calsequestrin-1; Laminin-binding protein; LOC686019; similar to Calsequestrin-1 precursor (Calsequestrin, skeletal muscle isoform)
Orthologs:
Homo sapiens (human) : CASQ1 (calsequestrin 1)  HGNC  Alliance
Mus musculus (house mouse) : Casq1 (calsequestrin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Casq1 (calsequestrin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CASQ1 (calsequestrin 1)
Canis lupus familiaris (dog) : CASQ1 (calsequestrin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Casq1 (calsequestrin 1)
Sus scrofa (pig) : CASQ1 (calsequestrin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01390,592,676 - 90,602,365 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01395,113,781 - 95,123,470 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41388,200,506 - 88,210,418 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1384,282,072 - 84,291,712 (-)NCBICelera
Cytogenetic Map13q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Casq1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1586677
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.