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Gene: Rp1l1 (RP1 like 1) Rattus norvegicus
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Symbol: Rp1l1
Name: RP1 like 1
Description: Predicted to be involved in several processes, including axoneme assembly; photoreceptor cell development; and photoreceptor cell maintenance. Predicted to localize to the axoneme; photoreceptor connecting cilium; and photoreceptor outer segment. Human ortholog(s) of this gene implicated in occult macular dystrophy. Orthologous to human RP1L1 (RP1 like 1); INTERACTS WITH 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog); 2,2',5,5'-tetrachlorobiphenyl (ortholog); aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC683404; retinitis pigmentosa 1-like 1; similar to Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa 1-like protein 1)
Orthologs:
Homo sapiens (human) : RP1L1 (RP1 like 1)  HGNC  Alliance
Mus musculus (house mouse) : Rp1l1 (retinitis pigmentosa 1 homolog like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rp1l1 (RP1 like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RP1L1 (RP1 like 1)
Canis lupus familiaris (dog) : RP1L1 (RP1 like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rp1l1 (RP1 like 1)
Sus scrofa (pig) : RP1L1 (RP1 like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01547,344,380 - 47,384,461 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1547,373,120 - 47,383,508 (+)Ensembl
Rnor_5.01551,117,811 - 51,143,753 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1537,912,769 - 37,952,844 (+)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rp1l1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1586886
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.