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Gene: Atg10 (autophagy related 10) Rattus norvegicus
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Symbol: Atg10
Name: autophagy related 10
Description: Predicted to have Atg12 transferase activity. Predicted to be involved in several processes, including ER overload response; cellular protein modification process; and macroautophagy. Orthologous to human ATG10 (autophagy related 10); PARTICIPATES IN autophagy pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: autophagy related 10 homolog; autophagy related 10 homolog (S. cerevisiae); autophagy-related 10; autophagy-related 10 (S. cerevisiae); autophagy-related protein 10; LOC688555; similar to autophagy-related 10-like; ubiquitin-like-conjugating enzyme ATG10
Orthologs:
Homo sapiens (human) : ATG10 (autophagy related 10)  HGNC  Alliance
Mus musculus (house mouse) : Atg10 (autophagy related 10)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg10 (autophagy related 10)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG10 (autophagy related 10)
Canis lupus familiaris (dog) : ATG10 (autophagy related 10)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg10 (autophagy related 10)
Sus scrofa (pig) : ATG10 (autophagy related 10)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0219,853,546 - 20,152,918 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0219,729,784 - 20,026,450 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4221,076,289 - 21,374,627 (-)NCBIRGSC3.4rn4RGSC3.4
Celera218,236,510 - 18,521,138 (-)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atg10
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1587624
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.