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Gene: H2az2 (H2A.Z variant histone 2) Rattus norvegicus
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Symbol: H2az2
Name: H2A.Z variant histone 2
Description: Predicted to have DNA binding activity. Predicted to be involved in chromatin organization. Predicted to localize to the nuclear chromatin. Orthologous to human H2AFV (H2A histone family member V); INTERACTS WITH (+)-catechin (ortholog); (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE (ortholog); 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: H2A histone family, member V; H2A.Z-2; H2afv; LOC685909; similar to H2A histone family, member V isoform 1
Orthologs:
Homo sapiens (human) : H2AZ2 (H2A.Z variant histone 2)  HGNC  Alliance
Mus musculus (house mouse) : H2az2 (H2A.Z histone variant 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102016130 (histone H2A.V)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100974682 (histone H2A.V)
Canis lupus familiaris (dog) : H2AFV (H2A histone family, member V)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101962450 (histone H2A.V)
Sus scrofa (pig) : LOC100512448 (histone H2A.V)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01486,687,782 - 86,706,639 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01480,320,991 - 80,339,905 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41487,180,334 - 87,199,178 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1480,174,623 - 80,193,467 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on H2az2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1587865
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-09-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.