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Gene: Tpgs1 (tubulin polyglutamylase complex subunit 1) Rattus norvegicus
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Symbol: Tpgs1
Name: tubulin polyglutamylase complex subunit 1
Description: Predicted to have microtubule binding activity and tubulin-glutamic acid ligase activity. Predicted to be involved in several processes, including adult behavior; protein polyglutamylation; and sperm axoneme assembly. Predicted to localize to the centrosome. Orthologous to human TPGS1 (tubulin polyglutamylase complex subunit 1); INTERACTS WITH bisphenol A; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog); 2,2',5,5'-tetrachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: gene trap ROSA b-geo 22; Gtrgeo22; LOC691093; PGs1; similar to gene trap ROSA b-geo 22
Orthologs:
Homo sapiens (human) : TPGS1 (tubulin polyglutamylase complex subunit 1)  HGNC  Alliance
Mus musculus (house mouse) : Tpgs1 (tubulin polyglutamylase complex subunit 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tpgs1 (tubulin polyglutamylase complex subunit 1)
Canis lupus familiaris (dog) : TPGS1 (tubulin polyglutamylase complex subunit 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tpgs1 (tubulin polyglutamylase complex subunit 1)
Sus scrofa (pig) : TPGS1 (tubulin polyglutamylase complex subunit 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0712,912,251 - 12,918,173 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0713,080,966 - 13,086,888 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4711,546,760 - 11,552,682 (-)NCBIRGSC3.4rn4RGSC3.4
Celera78,203,089 - 8,209,005 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tpgs1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1588613
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.