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Gene: Vipas39 (VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog) Rattus norvegicus
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Symbol: Vipas39
Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Description: Predicted to be involved in several processes, including cellular protein modification process; collagen fibril organization; and endosome to lysosome transport. Predicted to localize to the Golgi apparatus and endosome. Human ortholog(s) of this gene implicated in ARC syndrome. Orthologous to human VIPAS39 (VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog); INTERACTS WITH bisphenol A; endosulfan; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hSPE-39; hypothetical protein LOC681989; LOC681989; protein spe-39 homolog; similar to defective SPErmatogenesis family member (spe-39); Spe39; spermatogenesis-defective protein 39 homolog; Vipar; VPS33B-interacting protein; VPS33B-interacting protein in apical-basolateral polarity regulator; VPS33B-interacting protein in polarity and apical restriction
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06111,271,283 - 111,296,013 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06120,553,710 - 120,578,008 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera6104,708,561 - 104,733,217 (-)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vipas39
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1589291
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.