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Gene: Pou5f2 (POU domain class 5, transcription factor 2) Rattus norvegicus
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Symbol: Pou5f2
Name: POU domain class 5, transcription factor 2
Description: Predicted to have sequence-specific DNA binding activity. Predicted to be involved in several processes, including cell differentiation; regulation of transcription, DNA-templated; and spermatogenesis. Predicted to localize to the nucleus. Orthologous to human POU5F2 (POU domain class 5, transcription factor 2); INTERACTS WITH ammonium chloride; bisphenol A; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC679507; LOC680620; POU domain, class 5, transcription factor 2; similar to Sperm 1 POU-domain transcription factor (SPRM-1); sperm 1 POU domain transcription factor; sperm 1 POU-domain transcription factor; sperm-associated POU domain protein 1; Sprm-1; Sprm1
Orthologs:
Homo sapiens (human) : POU5F2 (POU domain class 5, transcription factor 2)  HGNC  Alliance
Mus musculus (house mouse) : Pou5f2 (POU domain class 5, transcription factor 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pou5f2 (POU domain class 5, transcription factor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : POU5F2 (POU domain class 5, transcription factor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pou5f2 (POU domain class 5, transcription factor 2)
Sus scrofa (pig) : POU5F2 (POU domain class 5, transcription factor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.025,437,067 - 5,438,301 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.025,416,352 - 5,417,586 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.425,621,260 - 5,622,494 (+)NCBIRGSC3.4rn4RGSC3.4
Celera24,358,043 - 4,359,277 (+)NCBICelera
Cytogenetic Map2q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pou5f2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1589456
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.