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Gene: Cfap54 (cilia and flagella associated protein 54) Rattus norvegicus
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Symbol: Cfap54
Name: cilia and flagella associated protein 54
Description: Predicted to be involved in cilium assembly; cilium movement involved in cell motility; and spermatogenesis. Predicted to localize to the axoneme. Orthologous to human CFAP54 (cilia and flagella associated protein 54); INTERACTS WITH bisphenol A; 4-hydroxyphenyl retinamide (ortholog); aflatoxin B1 (ortholog).
Type: protein-coding
Also known as: cilia and flagella associated 54; hypothetical protein LOC680606; LOC680606
Orthologs:
Homo sapiens (human) : CFAP54 (cilia and flagella associated protein 54)  HGNC  Alliance
Mus musculus (house mouse) : Cfap54 (cilia and flagella associated protein 54)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cfap54 (cilia and flagella associated protein 54)
Pan paniscus (bonobo/pygmy chimpanzee) : CFAP54 (cilia and flagella associated protein 54)
Canis lupus familiaris (dog) : CFAP54 (cilia and flagella associated protein 54)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cfap54 (cilia and flagella associated protein 54)
Sus scrofa (pig) : CFAP54 (cilia and flagella associated protein 54)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0733,867,656 - 33,916,487 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0733,937,294 - 33,986,748 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4730,042,172 - 30,093,555 (-)NCBIRGSC3.4rn4RGSC3.4
Celera724,658,741 - 24,703,461 (-)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cfap54
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1589470
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.