Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tubb1 (tubulin, beta 1 class VI) Rattus norvegicus
Symbol: Tubb1
Name: tubulin, beta 1 class VI
Description: Predicted to have GTP binding activity. Predicted to be involved in mitotic cell cycle and spindle assembly. Predicted to localize to cytoplasm and microtubule. Human ortholog(s) of this gene implicated in autosomal dominant macrothrombocytopenia TUBB1-related. Orthologous to human TUBB1 (tubulin beta 1 class VI); PARTICIPATES IN docetaxel pharmacodynamics pathway; tyrosinemia type III pathway; vinblastine pharmacodynamics pathway; INTERACTS WITH ammonium chloride; bisphenol A; phenformin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC679312; similar to beta tubulin 1, class VI; tubulin beta-1 chain
Homo sapiens (human) : TUBB1 (tubulin beta 1 class VI)  HGNC  Alliance
Mus musculus (house mouse) : Tubb1 (tubulin, beta 1 class VI)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tubb1 (tubulin beta 1 class VI)
Pan paniscus (bonobo/pygmy chimpanzee) : TUBB1 (tubulin beta 1 class VI)
Canis lupus familiaris (dog) : TUBB1 (tubulin beta 1 class VI)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tubb1 (tubulin beta 1 class VI)
Sus scrofa (pig) : TUBB1 (tubulin beta 1 class VI)
Chlorocebus sabaeus (African green monkey) : TUBB1 (tubulin beta 1 class VI)
Heterocephalus glaber (naked mole-rat) : Tubb1 (tubulin beta 1 class VI)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.03172,550,252 - 172,558,089 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3172,550,258 - 172,558,114 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03178,597,398 - 178,607,497 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera3162,421,439 - 162,429,284 (+)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Tubb1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1589557
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.