Gene: Col4a6 (collagen type IV alpha 6 chain) Rattus norvegicus
Symbol: Col4a6
Name: collagen type IV alpha 6 chain
Description: Predicted to have structural molecule activity; predicted to be involved in cellular response to amino acid stimulus, collagen-activated tyrosine kinase receptor signaling pathway, and extracellular matrix organization; predicted to localize to the collagen type IV trimer; orthologous to human COL4A6 (collagen type IV alpha 6 chain); INTERACTS WITH lead diacetate; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 3-isobutyl-1-methyl-7H-xanthine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: collagen alpha-6(IV) chain; collagen, type IV, alpha 6; LOC363458; LOW QUALITY PROTEIN: collagen alpha-6(IV) chain; similar to procollagen, type IV, alpha 6
Homo sapiens (human) : COL4A6 (collagen type IV alpha 6 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col4a6 (collagen, type IV, alpha 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col4a6 (collagen type IV alpha 6 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL4A6 (collagen type IV alpha 6 chain)
Canis lupus familiaris (dog) : COL4A6 (collagen type IV alpha 6 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col4a6 (collagen type IV alpha 6 chain)
Sus scrofa (pig) : COL4A6 (collagen type IV alpha 6 chain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0X112,405,647 - 112,768,337 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X110,869,083 - 111,225,229 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X37,316,545 - 37,485,511 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX104,184,917 - 104,528,021 (-)NCBICelera
Cytogenetic MapXq33NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
More on Col4a6
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1589724
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.