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Gene: Atg2a (autophagy related 2A) Rattus norvegicus
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Symbol: Atg2a
Name: autophagy related 2A
Description: Predicted to be involved in autophagosome assembly and autophagy of mitochondrion. Predicted to localize to the cytoplasm; extrinsic component of membrane; and nucleus. Orthologous to human ATG2A (autophagy related 2A); INTERACTS WITH bisphenol A; diethylstilbestrol; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATG2 autophagy related 2 homolog A; ATG2 autophagy related 2 homolog A (S. cerevisiae); autophagy-related protein 2 homolog A; LOC689688; similar to Autophagy-specific gene 2 CG1241-PA
Orthologs:
Homo sapiens (human) : ATG2A (autophagy related 2A)  HGNC  Alliance
Mus musculus (house mouse) : Atg2a (autophagy related 2A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg2a (autophagy related 2A)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG2A (autophagy related 2A)
Canis lupus familiaris (dog) : ATG2A (autophagy related 2A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg2a (autophagy related 2A)
Sus scrofa (pig) : ATG2A (autophagy related 2A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01221,612,584 - 221,632,291 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01228,596,022 - 228,617,368 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41209,017,869 - 209,037,552 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1201,076,139 - 201,095,777 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atg2a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1589890
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.