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Gene: Gpn1 (GPN-loop GTPase 1) Rattus norvegicus
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Symbol: Gpn1
Name: GPN-loop GTPase 1
Description: Predicted to have GTPase activity. Predicted to localize to cytosol; mitochondrion; and nucleoplasm. Orthologous to human GPN1 (GPN-loop GTPase 1); INTERACTS WITH bisphenol A; 17alpha-ethynylestradiol (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC688393; LOC688393; similar to XPA binding protein 1; uncharacterized protein LOC688393
Orthologs:
Homo sapiens (human) : GPN1 (GPN-loop GTPase 1)  HGNC  Alliance
Mus musculus (house mouse) : Gpn1 (GPN-loop GTPase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gpn1 (GPN-loop GTPase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GPN1 (GPN-loop GTPase 1)
Canis lupus familiaris (dog) : LOC475707 (GPN-loop GTPase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gpn1 (GPN-loop GTPase 1)
Sus scrofa (pig) : GPN1 (GPN-loop GTPase 1)
Chlorocebus sabaeus (African green monkey) : GPN1 (GPN-loop GTPase 1)
Heterocephalus glaber (naked mole-rat) : Gpn1 (GPN-loop GTPase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0626,255,081 - 26,272,755 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,242,925 - 26,272,808 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,078,631 - 36,096,305 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,007,677 - 25,025,341 (-)NCBIRGSC3.4rn4RGSC3.4
Celera624,442,054 - 24,459,728 (-)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gpn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1589985
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.