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Gene: Tspan10 (tetraspanin 10) Rattus norvegicus
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Symbol: Tspan10
Name: tetraspanin 10
Description: Predicted to have enzyme binding activity. Predicted to be involved in establishment of protein localization to organelle and protein maturation. Predicted to localize to integral component of plasma membrane. Orthologous to human TSPAN10 (tetraspanin 10); INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 4,4'-diaminodiphenylmethane (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC688308; similar to tetraspanin 10; tetraspanin-10
Orthologs:
Homo sapiens (human) : TSPAN10 (tetraspanin 10)  HGNC  Alliance
Mus musculus (house mouse) : Tspan10 (tetraspanin 10)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tspan10 (tetraspanin 10)
Pan paniscus (bonobo/pygmy chimpanzee) : TSPAN10 (tetraspanin 10)
Canis lupus familiaris (dog) : LOC483364 (tetraspanin-10)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tspan10 (tetraspanin 10)
Sus scrofa (pig) : TSPAN10 (tetraspanin 10)
Chlorocebus sabaeus (African green monkey) : TSPAN10 (tetraspanin 10)
Heterocephalus glaber (naked mole-rat) : Tspan10 (tetraspanin 10)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010109,614,664 - 109,619,581 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10109,614,965 - 109,618,807 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010109,208,382 - 109,213,084 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10104,259,719 - 104,264,642 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tspan10
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1590062
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.