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Gene: Hoxa6 (homeobox A6) Rattus norvegicus
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Symbol: Hoxa6
Name: homeobox A6
Description: Predicted to have RNA polymerase II distal enhancer sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification and embryonic skeletal system morphogenesis. Predicted to localize to the nucleus. Orthologous to human HOXA6 (homeobox A6); INTERACTS WITH bisphenol A; boric acid; Monobutylphthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeobox protein Hox-A6; LOC685732; similar to Homeobox protein Hox-A6 (Hox-1.2) (M5-4)
Orthologs:
Homo sapiens (human) : HOXA6 (homeobox A6)  HGNC  Alliance
Mus musculus (house mouse) : Hoxa6 (homeobox A6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxa6 (homeobox A6)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXA6 (homeobox A6)
Canis lupus familiaris (dog) : HOXA7 (homeobox A7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxa6 (homeobox A6)
Sus scrofa (pig) : HOXA6 (homeobox A6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0482,173,478 - 82,183,597 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04146,840,309 - 146,848,992 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4480,506,290 - 80,508,743 (-)NCBIRGSC3.4rn4RGSC3.4
Celera476,197,110 - 76,199,563 (-)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hoxa6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1590236
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.