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Gene: Tet3 (tet methylcytosine dioxygenase 3) Rattus norvegicus
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Symbol: Tet3
Name: tet methylcytosine dioxygenase 3
Description: Predicted to have methyl-CpG binding activity; methylcytosine dioxygenase activity; and zinc ion binding activity. Predicted to be involved in several processes, including DNA methylation or demethylation; cellular protein modification process; and oxidative demethylation. Predicted to localize to cytoplasm; female pronucleus; and male pronucleus. Orthologous to human TET3 (tet methylcytosine dioxygenase 3); PARTICIPATES IN DNA modification pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amphetamine; arsenous acid.
Type: protein-coding
RefSeq Status: MODEL
Also known as: astrotactin-2-like; hypothetical protein LOC680588; LOC102550055; LOC500229; LOC680576; methylcytosine dioxygenase TET3; probable methylcytosine dioxygenase TET3; similar to CXXC finger 6; similar to MGC22014 protein; tet oncogene family member 3
Orthologs:
Homo sapiens (human) : TET3 (tet methylcytosine dioxygenase 3)  HGNC  Alliance
Mus musculus (house mouse) : Tet3 (tet methylcytosine dioxygenase 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tet3 (tet methylcytosine dioxygenase 3)
Pan paniscus (bonobo/pygmy chimpanzee) : TET3 (tet methylcytosine dioxygenase 3)
Canis lupus familiaris (dog) : TET3 (tet methylcytosine dioxygenase 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tet3 (tet methylcytosine dioxygenase 3)
Sus scrofa (pig) : TET3 (tet methylcytosine dioxygenase 3)
Chlorocebus sabaeus (African green monkey) : TET3 (tet methylcytosine dioxygenase 3)
Heterocephalus glaber (naked mole-rat) : Tet3 (tet methylcytosine dioxygenase 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04115,060,702 - 115,160,800 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4115,066,309 - 115,157,263 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04179,650,812 - 179,747,154 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44117,582,351 - 117,659,282 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4104,861,292 - 104,961,373 (-)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tet3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1590584
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.