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Gene: Rnf170 (ring finger protein 170) Rattus norvegicus
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Symbol: Rnf170
Name: ring finger protein 170
Description: Predicted to have metal ion binding activity and ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in autosomal dominant sensory ataxia 1. Orthologous to human RNF170 (ring finger protein 170); INTERACTS WITH (+)-schisandrin B; bisphenol A; fipronil.
Type: protein-coding
RefSeq Status: MODEL
Also known as: E3 ubiquitin-protein ligase RNF170; LOC364654; similar to ring finger protein 170; uncharacterized protein LOC364654
Orthologs:
Homo sapiens (human) : RNF170 (ring finger protein 170)  HGNC  Alliance
Mus musculus (house mouse) : Rnf170 (ring finger protein 170)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnf170 (ring finger protein 170)
Pan paniscus (bonobo/pygmy chimpanzee) : RNF170 (ring finger protein 170)
Canis lupus familiaris (dog) : RNF170 (ring finger protein 170)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnf170 (ring finger protein 170)
Sus scrofa (pig) : RNF170 (ring finger protein 170)
Heterocephalus glaber (naked mole-rat) : Rnf170 (ring finger protein 170)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01670,684,886 - 70,710,147 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1670,687,487 - 70,705,128 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01670,350,525 - 70,376,322 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1663,840,220 - 63,865,468 (-)NCBICelera
Cytogenetic Map16q12.4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rnf170
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1590842
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.