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Gene: Chaf1a (chromatin assembly factor 1 subunit A) Rattus norvegicus
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Symbol: Chaf1a
Name: chromatin assembly factor 1 subunit A
Description: Predicted to have chromo shadow domain binding activity and identical protein binding activity. Predicted to be involved in DNA replication-dependent nucleosome assembly. Predicted to localize to the CAF-1 complex and nuclear chromatin. Human ortholog(s) of this gene implicated in colon cancer; malignant glioma; neuroblastoma; and systemic lupus erythematosus. Orthologous to human CHAF1A (chromatin assembly factor 1 subunit A); PARTICIPATES IN histone modification pathway; INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: chromatin assembly factor 1, subunit A (p150); LOC363333; similar to Chromatin assembly factor 1 subunit A (CAF-1 subunit A) (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150)
Orthologs:
Homo sapiens (human) : CHAF1A (chromatin assembly factor 1 subunit A)  HGNC  Alliance
Mus musculus (house mouse) : Chaf1a (chromatin assembly factor 1, subunit A (p150))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chaf1a (chromatin assembly factor 1 subunit A)
Pan paniscus (bonobo/pygmy chimpanzee) : CHAF1A (chromatin assembly factor 1 subunit A)
Canis lupus familiaris (dog) : CHAF1A (chromatin assembly factor 1 subunit A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chaf1a (chromatin assembly factor 1 subunit A)
Sus scrofa (pig) : CHAF1A (chromatin assembly factor 1 subunit A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0911,000,869 - 11,027,631 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.099,987,808 - 10,013,968 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,606,375 - 7,633,116 (-)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Chaf1a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1590865
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.