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Gene: Pan3 (poly(A) specific ribonuclease subunit PAN3) Rattus norvegicus
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Symbol: Pan3
Name: poly(A) specific ribonuclease subunit PAN3
Description: Predicted to contribute to poly(A)-specific ribonuclease activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; positive regulation of cytoplasmic mRNA processing body assembly; and protein targeting. Predicted to localize to P-body and PAN complex. Orthologous to human PAN3 (poly(A) specific ribonuclease subunit PAN3); PARTICIPATES IN microRNA pathway; RNA degradation pathway; INTERACTS WITH bisphenol A; C60 fullerene; oxaliplatin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC360760; PAB-dependent poly(A)-specific ribonuclease subunit PAN3; PAN3 poly(A) specific ribonuclease subunit; PAN3 polyA specific ribonuclease subunit homolog; PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae); similar to PABP-dependent poly(A) nuclease 3
Orthologs:
Homo sapiens (human) : PAN3 (poly(A) specific ribonuclease subunit PAN3)  HGNC  Alliance
Mus musculus (house mouse) : Pan3 (PAN3 poly(A) specific ribonuclease subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pan3 (poly(A) specific ribonuclease subunit PAN3)
Pan paniscus (bonobo/pygmy chimpanzee) : PAN3 (poly(A) specific ribonuclease subunit PAN3)
Canis lupus familiaris (dog) : PAN3 (poly(A) specific ribonuclease subunit PAN3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pan3 (poly(A) specific ribonuclease subunit PAN3)
Sus scrofa (pig) : PAN3 (poly(A) specific ribonuclease subunit PAN3)
Chlorocebus sabaeus (African green monkey) : PAN3 (poly(A) specific ribonuclease subunit PAN3)
Heterocephalus glaber (naked mole-rat) : Pan3 (poly(A) specific ribonuclease subunit PAN3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0129,214,116 - 9,331,901 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl129,216,536 - 9,331,195 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01211,333,266 - 11,449,831 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4128,046,162 - 8,165,081 (-)NCBIRGSC3.4rn4RGSC3.4
Celera129,218,136 - 9,336,110 (-)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pan3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1590880
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.