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Gene: Kdm4d (lysine demethylase 4D) Rattus norvegicus
Symbol: Kdm4d
Name: lysine demethylase 4D
CRRD ID: 1591045
Description: Predicted to have chromatin DNA binding activity; damaged DNA binding activity; and histone demethylase activity (H3-K9 specific). Predicted to be involved in several processes, including chromatin organization; positive regulation of double-strand break repair via nonhomologous end joining; and regulation of protein modification process. Predicted to localize to histone methyltransferase complex; pericentric heterochromatin; and site of double-strand break. Orthologous to human KDM4D (lysine demethylase 4D); PARTICIPATES IN histone modification pathway; INTERACTS WITH bisphenol A; decabromodiphenyl ether; furan.
Type: protein-coding
Also known as: [histone H3]-trimethyl-L-lysine(9) demethylase 4D; jmjC domain-containing histone demethylation protein 3D; jumonji domain-containing protein 2D; LOC689582; lysine (K)-specific demethylase 4D; lysine-specific demethylase 4D; MGC156756; similar to jumonji domain containing 2D
Homo sapiens (human) : KDM4D (lysine demethylase 4D)  HGNC  Alliance
Mus musculus (house mouse) : Kdm4d (lysine (K)-specific demethylase 4D)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kdm4d (lysine demethylase 4D)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM4D (lysine demethylase 4D)
Canis lupus familiaris (dog) : KDM4D (lysine demethylase 4D)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm4d (lysine demethylase 4D)
Sus scrofa (pig) : LOC100627380 (lysine-specific demethylase 4D-like)
Chlorocebus sabaeus (African green monkey) : KDM4D (lysine demethylase 4D)
Heterocephalus glaber (naked mole-rat) : Kdm4d (lysine demethylase 4D)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0812,968,192 - 12,993,651 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl813,511,805 - 13,513,337 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0813,454,239 - 13,456,523 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4811,222,556 - 11,247,715 (-)NCBIRGSC3.4rn4RGSC3.4
Celera812,774,633 - 12,798,709 (-)NCBICelera
Cytogenetic Map8q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Kdm4d
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1591045
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.