Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: LOC689574 (hypothetical protein LOC689574) Rattus norvegicus
Analyze
Symbol: LOC689574
Name: hypothetical protein LOC689574
Description: Predicted to localize to mitochondrial respirasome. Orthologous to human STMP1 (short transmembrane mitochondrial protein 1); INTERACTS WITH bisphenol A (ortholog); cadmium dichloride (ortholog); copper atom (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: PL-5283 protein; uncharacterized protein C7orf73 homolog
Orthologs:
Homo sapiens (human) : STMP1 (short transmembrane mitochondrial protein 1)  HGNC  Alliance
Mus musculus (house mouse) : 1810058I24Rik (RIKEN cDNA 1810058I24 gene)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Stmp1 (short transmembrane mitochondrial protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : STMP1 (short transmembrane mitochondrial protein 1)
Canis lupus familiaris (dog) : STMP1 (short transmembrane mitochondrial protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stmp1 (short transmembrane mitochondrial protein 1)
Sus scrofa (pig) : STMP1 (short transmembrane mitochondrial protein 1)
Chlorocebus sabaeus (African green monkey) : STMP1 (short transmembrane mitochondrial protein 1)
Heterocephalus glaber (naked mole-rat) : Stmp1 (short transmembrane mitochondrial protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0462,780,596 - 62,790,428 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl462,780,596 - 62,790,422 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0462,503,531 - 62,513,363 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4462,662,808 - 62,672,768 (+)NCBIRGSC3.4rn4RGSC3.4
Celera458,975,733 - 58,985,565 (+)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC689574
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1591053
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.