Gene: Tmc6 (transmembrane channel like 6) Rattus norvegicus
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Symbol: Tmc6
Name: transmembrane channel like 6
Description: Predicted to localize to the Golgi apparatus, endoplasmic reticulum, and nuclear membrane; orthologous to human TMC6 (transmembrane channel like 6); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 4-hydroxyphenyl retinamide (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC688280; similar to transmembrane channel-like protein 6 isoform 1
Orthologs:
Homo sapiens (human) : TMC6 (transmembrane channel like 6)  HGNC  Alliance
Mus musculus (house mouse) : Tmc6 (transmembrane channel-like gene family 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmc6 (transmembrane channel like 6)
Pan paniscus (bonobo/pygmy chimpanzee) : TMC6 (transmembrane channel like 6)
Canis lupus familiaris (dog) : TMC6 (transmembrane channel like 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmc6 (transmembrane channel like 6)
Sus scrofa (pig) : TMC6 (transmembrane channel like 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: spans an assembly gap
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010106,766,857 - 106,783,004 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010106,405,613 - 106,420,792 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10101,542,906 - 101,560,725 (-)NCBICelera
Cytogenetic Map10q32.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmc6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1591146
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.