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Gene: Pja1 (praja ring finger ubiquitin ligase 1) Rattus norvegicus
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Symbol: Pja1
Name: praja ring finger ubiquitin ligase 1
Description: Predicted to have ubiquitin protein ligase activity. Predicted to be involved in protein catabolic process and protein ubiquitination. Predicted to localize to the cytoplasm. Orthologous to human PJA1 (praja ring finger ubiquitin ligase 1); INTERACTS WITH bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 2-butoxyethanol (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase Praja-1; hypothetical protein LOC683077; LOC683077; praja ring finger 1, E3 ubiquitin protein ligase; similar to praja1, RING-H2 motif containing; uncharacterized protein LOC683077
Orthologs:
Homo sapiens (human) : PJA1 (praja ring finger ubiquitin ligase 1)  HGNC  Alliance
Mus musculus (house mouse) : Pja1 (praja ring finger ubiquitin ligase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pja1 (praja ring finger ubiquitin ligase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PJA1 (praja ring finger ubiquitin ligase 1)
Canis lupus familiaris (dog) : PJA1 (praja ring finger ubiquitin ligase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pja1 (praja ring finger ubiquitin ligase 1)
Sus scrofa (pig) : PJA1 (praja ring finger ubiquitin ligase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X69,213,645 - 69,218,601 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX69,213,645 - 69,218,556 (-)Ensembl
Rnor_5.0X70,086,011 - 70,090,962 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX64,945,766 - 64,948,345 (-)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pja1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1591532
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.